STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000374345_01775Unannotated protein. (280 aa)    
Predicted Functional Partners:
GCA_000374345_01774
Unannotated protein.
       0.550
GCA_000374345_00583
Unannotated protein.
  
  
 0.548
GCA_000374345_01224
Unannotated protein.
 
    0.497
GCA_000374345_01181
Unannotated protein.
 
   
 0.476
GCA_000374345_00513
Unannotated protein.
  
   
 0.440
GCA_000374345_01777
Unannotated protein.
  
    0.439
GCA_000374345_02534
Unannotated protein.
  
    0.430
GCA_000374345_00021
Unannotated protein.
     
 0.423
GCA_000374345_00119
Unannotated protein.
   
 
 0.423
Your Current Organism:
Bacillus acidiproducens
NCBI taxonomy Id: 444461
Other names: B. acidiproducens DSM 23148, Bacillus acidiproducens DSM 23148, Bacillus sp. SL213
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.