STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000374345_01930Unannotated protein. (149 aa)    
Predicted Functional Partners:
GCA_000374345_01929
Unannotated protein.
       0.588
GCA_000374345_03011
Unannotated protein.
    
  0.539
GCA_000374345_01319
Unannotated protein.
  
  
 0.493
GCA_000374345_02593
Unannotated protein.
  
  
 0.487
GCA_000374345_01938
Unannotated protein.
   
  
 0.459
GCA_000374345_02534
Unannotated protein.
   
  
 0.456
GCA_000374345_00366
Unannotated protein.
   
    0.454
GCA_000374345_01682
Unannotated protein.
    
  0.439
GCA_000374345_03019
Unannotated protein.
    
  0.439
GCA_000374345_02035
Unannotated protein.
   
    0.418
Your Current Organism:
Bacillus acidiproducens
NCBI taxonomy Id: 444461
Other names: B. acidiproducens DSM 23148, Bacillus acidiproducens DSM 23148, Bacillus sp. SL213
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.