STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORA61984.1LytTR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (384 aa)    
Predicted Functional Partners:
ORA69032.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
0.796
ORA71085.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.784
ORA69929.1
Mycofactocin system transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.780
cobB-2
NAD-dependent protein deacylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sirtuin family. Class III subfamily.
   
    0.780
ORA66567.1
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.780
ORA67746.1
Transcriptional regulator, LytR family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
0.775
ORA73787.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.770
ORA73080.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.768
ORA71608.1
PucR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.768
ORA74134.1
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.764
Your Current Organism:
Mycolicibacterium insubricum
NCBI taxonomy Id: 444597
Other names: CIP 109609, DSM 45132, JCM 16366, M. insubricum, Mycobacterium insubricum, Mycobacterium insubricum Tortoli et al. 2009, Mycolicibacterium insubricum (Tortoli et al. 2009) Gupta et al. 2018, strain FI-06250
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.