Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ALE77220.1Ribulose 5-phosphate epimerase. (228 aa)    
Predicted Functional Partners:
araB
Ribulokinase.
 
 
 0.997
araA
Arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
 
  
 0.976
ALE77940.1
Xylulose kinase.
 
 
 0.954
ALE78090.1
Sugar kinase; Belongs to the FGGY kinase family.
  
 
 0.940
ALE81180.1
Hypothetical protein.
  
 
 0.940
ALE77724.1
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
  
 
 0.917
ALE77804.1
citryl-CoA lyase; Belongs to the HpcH/HpaI aldolase family.
   
  
 0.701
ALE78496.1
Citrate lyase; Belongs to the HpcH/HpaI aldolase family.
   
  
 0.701
ALE80543.1
Citrate (pro-3S)-lyase; Belongs to the HpcH/HpaI aldolase family.
   
  
 0.701
metH
B12-dependent methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
  
 0.603
Your Current Organism:
Pseudonocardia sp. AL04100510
NCBI taxonomy Id: 445576
Other names: P. sp. AL041005-10, Pseudonocardia sp. AL041005-10
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