STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALE77222.1Sugar ABC transporter substrate-binding protein. (376 aa)    
Predicted Functional Partners:
ALE77223.1
ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
 0.959
ALE81590.1
ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.806
ALE80978.1
Sugar ABC transporter.
 
 
 0.666
ALE80977.1
Sugar ABC transporter ATP-binding protein.
 
 0.651
ALE77261.1
Ribose ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.622
araB
Ribulokinase.
 
     0.615
araA
Arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
 
     0.609
ALE78674.1
Sugar-binding protein.
 
 
 0.597
ALE81589.1
Sugar ABC transporter ATP-binding protein.
 
 0.596
ALE77220.1
Ribulose 5-phosphate epimerase.
 
  
 0.591
Your Current Organism:
Pseudonocardia sp. AL04100510
NCBI taxonomy Id: 445576
Other names: P. sp. AL041005-10, Pseudonocardia sp. AL041005-10
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