STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALE77224.1LacI family transcriptional regulator. (341 aa)    
Predicted Functional Partners:
ALE81072.1
Glutamate synthase.
    
 
 0.749
ALE77223.1
ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
     0.628
ALE77940.1
Xylulose kinase.
 
 
 
 0.553
ALE80913.1
Hypothetical protein.
 
 
 
 0.480
ALE81589.1
Sugar ABC transporter ATP-binding protein.
 
  
 0.445
ALE81270.1
Beta-glucosidase.
 
   
 0.432
xylA
Xylose isomerase; Catalyzes the interconversion of D-xylose to D-xylulose; Belongs to the xylose isomerase family.
 
   
 0.416
ALE79478.1
Phosphocarrier protein HPr.
   
 
 0.401
Your Current Organism:
Pseudonocardia sp. AL04100510
NCBI taxonomy Id: 445576
Other names: P. sp. AL041005-10, Pseudonocardia sp. AL041005-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.