STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALE77248.1Methylmalonate-semialdehyde dehydrogenase. (497 aa)    
Predicted Functional Partners:
ALE80537.1
4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 0.934
ALE77806.1
acetyl-CoA synthetase.
  
 0.933
ALE78212.1
AMP-dependent synthetase.
  
 0.933
prpE
Catalyzes the formation of propionyl-CoA using propionate as a substrate; PrpE from Ralstonia solanacearum can produce acetyl-, propionyl-, butyryl- and acrylyl-coenzyme A, and Salmonella enterica produces propionyl- and butyryl-coenzyme A; not expressed in Escherichia coli when grown on propionate/minimal media; ATP-dependent.
  
 0.933
ALE80312.1
AMP-dependent synthetase.
  
 0.933
ALE80236.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.923
ALE79948.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
  
 
0.921
ALE79979.1
Carnitine dehydratase; Belongs to the aldehyde dehydrogenase family.
  
  
 
0.920
ALE81129.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
  
 
0.917
ALE80358.1
3-hydroxyisobutyrate dehydrogenase.
  
 
 0.916
Your Current Organism:
Pseudonocardia sp. AL04100510
NCBI taxonomy Id: 445576
Other names: P. sp. AL041005-10, Pseudonocardia sp. AL041005-10
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