Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALE77290.1ABC transporter permease. (249 aa)    
Predicted Functional Partners:
ALE77289.1
Hypothetical protein.
 0.928
ALE81588.1
ABC transporter.
 0.882
ALE81586.1
ABC transporter permease.
 0.867
ALE78282.1
Nitrate ABC transporter ATPase.
 0.831
ALE78287.1
ABC transporter.
 0.831
ALE78277.1
ABC transporter.
 0.827
ALE78278.1
ABC transporter substrate-binding protein.
 
 0.796
ssuB
Sulfonate ABC transporter ATP-binding protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
 0.792
ALE78293.1
Sulfonate ABC transporter ATP-binding protein.
 0.792
ALE78273.1
Aliphatic sulfonate ABC transporter substrate-binding protein.
 
 0.788
Your Current Organism:
Pseudonocardia sp. AL04100510
NCBI taxonomy Id: 445576
Other names: P. sp. AL041005-10, Pseudonocardia sp. AL041005-10
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