STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALE77300.1GntR family transcriptional regulator. (218 aa)    
Predicted Functional Partners:
ALE77299.1
Isochorismatase.
 
     0.825
ALE77298.1
Hypothetical protein.
       0.773
ALE77588.1
Hypothetical protein.
  
     0.773
ALE79973.1
GntR family transcriptional regulator.
 
  
 0.736
ALE77932.1
GntR family transcriptional regulator.
 
  
 0.711
ALE80628.1
GntR family transcriptional regulator.
 
  
 0.710
ALE81536.1
GntR family transcriptional regulator.
 
  
 0.617
ALE77301.1
Carboxyvinyl-carboxyphosphonate phosphorylmutase.
  
  
 0.582
ALE77297.1
stearoyl-CoA 9-desaturase.
       0.508
Your Current Organism:
Pseudonocardia sp. AL04100510
NCBI taxonomy Id: 445576
Other names: P. sp. AL041005-10, Pseudonocardia sp. AL041005-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.