Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALE77361.1 | ALE77475.1 | WY02_01485 | WY02_02260 | Hypothetical protein; Belongs to the LysR transcriptional regulatory family. | LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.529 |
ALE77474.1 | ALE77475.1 | WY02_02255 | WY02_02260 | 3-phosphoglycerate dehydrogenase; Catalyzes the reversible oxidation of 3-phospho-D-glycerate to 3-phosphonooxypyruvate, the first step of the phosphorylated L- serine biosynthesis pathway. Also catalyzes the reversible oxidation of 2-hydroxyglutarate to 2-oxoglutarate; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.478 |
ALE77474.1 | ALE77476.1 | WY02_02255 | WY02_02265 | 3-phosphoglycerate dehydrogenase; Catalyzes the reversible oxidation of 3-phospho-D-glycerate to 3-phosphonooxypyruvate, the first step of the phosphorylated L- serine biosynthesis pathway. Also catalyzes the reversible oxidation of 2-hydroxyglutarate to 2-oxoglutarate; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Oxidoreductase. | 0.417 |
ALE77475.1 | ALE77361.1 | WY02_02260 | WY02_01485 | LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | Hypothetical protein; Belongs to the LysR transcriptional regulatory family. | 0.529 |
ALE77475.1 | ALE77474.1 | WY02_02260 | WY02_02255 | LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 3-phosphoglycerate dehydrogenase; Catalyzes the reversible oxidation of 3-phospho-D-glycerate to 3-phosphonooxypyruvate, the first step of the phosphorylated L- serine biosynthesis pathway. Also catalyzes the reversible oxidation of 2-hydroxyglutarate to 2-oxoglutarate; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.478 |
ALE77475.1 | ALE77476.1 | WY02_02260 | WY02_02265 | LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | Oxidoreductase. | 0.536 |
ALE77475.1 | ALE80282.1 | WY02_02260 | WY02_19745 | LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.619 |
ALE77476.1 | ALE77474.1 | WY02_02265 | WY02_02255 | Oxidoreductase. | 3-phosphoglycerate dehydrogenase; Catalyzes the reversible oxidation of 3-phospho-D-glycerate to 3-phosphonooxypyruvate, the first step of the phosphorylated L- serine biosynthesis pathway. Also catalyzes the reversible oxidation of 2-hydroxyglutarate to 2-oxoglutarate; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.417 |
ALE77476.1 | ALE77475.1 | WY02_02265 | WY02_02260 | Oxidoreductase. | LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.536 |
ALE80282.1 | ALE77475.1 | WY02_19745 | WY02_02260 | LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.619 |