STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALE77500.1TetR family transcriptional regulator. (200 aa)    
Predicted Functional Partners:
ALE77499.1
Pyridoxamine 5'-phosphate oxidase.
  
    0.755
ALE80207.1
Hypothetical protein.
  
     0.591
ALE81096.1
Polyketide cyclase.
  
     0.504
ALE80099.1
Hypothetical protein.
  
     0.492
ALE77949.1
phytanoyl-CoA dioxygenase.
  
     0.473
ALE79034.1
Hypothetical protein.
  
     0.466
ALE79305.1
Hypothetical protein.
  
     0.441
ALE77509.1
Hypothetical protein.
  
     0.428
ALE80900.1
Pesticidal protein Cry26Aa.
  
     0.426
ALE79481.1
Hypothetical protein.
  
     0.411
Your Current Organism:
Pseudonocardia sp. AL04100510
NCBI taxonomy Id: 445576
Other names: P. sp. AL041005-10, Pseudonocardia sp. AL041005-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.