Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ALE77506.1Luciferase. (341 aa)    
Predicted Functional Partners:
ALE77158.1
Peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
    
 0.633
ALE81353.1
Hypothetical protein.
    
 0.626
ALE77167.1
Peptide synthetase.
    
 0.625
ALE77176.1
Polyketide synthase.
  
 
 0.623
ALE77163.1
Peptide synthetase.
    
 0.612
ALE77159.1
Hypothetical protein.
    
 0.609
ALE77181.1
Modular polyketide synthase.
    
 0.609
ALE77179.1
Polyketide synthase.
    
 0.609
ALE77180.1
Polyketide synthase.
    
 0.609
ALE77166.1
Peptide synthetase.
    
 0.608
Your Current Organism:
Pseudonocardia sp. AL04100510
NCBI taxonomy Id: 445576
Other names: P. sp. AL041005-10, Pseudonocardia sp. AL041005-10
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