STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALE77586.1Dihydroxyacetone kinase. (570 aa)    
Predicted Functional Partners:
ALE77587.1
Triosephosphate isomerase.
 
   
 0.873
ALE77589.1
Xylose isomerase.
 
   
 0.839
ALE77588.1
Hypothetical protein.
 
     0.801
ALE77583.1
Hypothetical protein.
       0.545
ALE77584.1
Hypothetical protein.
       0.545
ALE77585.1
ATPase.
       0.545
ALE80084.1
Ribose 5-phosphate isomerase.
 
   
 0.510
ALE77582.1
3-oxoacyl-ACP reductase.
   
   0.476
ALE80081.1
DeoR faimly transcriptional regulator.
 
     0.423
Your Current Organism:
Pseudonocardia sp. AL04100510
NCBI taxonomy Id: 445576
Other names: P. sp. AL041005-10, Pseudonocardia sp. AL041005-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.