STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALE77589.1Xylose isomerase. (317 aa)    
Predicted Functional Partners:
ALE77586.1
Dihydroxyacetone kinase.
 
   
 0.843
ALE77587.1
Triosephosphate isomerase.
 
   
 0.835
ALE77588.1
Hypothetical protein.
 
     0.720
ALE77249.1
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Belongs to the TPP enzyme family.
  
  
 0.672
ALE80083.1
Dihydroxyacetone kinase.
 
   
 0.658
ALE80084.1
Ribose 5-phosphate isomerase.
 
   
 0.581
ALE77590.1
Major facilitator transporter.
 
    0.565
ALE77250.1
5-deoxyglucuronate isomerase.
  
  
 0.547
ALE81601.1
Hypothetical protein.
 
  
 0.518
ALE81599.1
Hypothetical protein.
 
  
 0.476
Your Current Organism:
Pseudonocardia sp. AL04100510
NCBI taxonomy Id: 445576
Other names: P. sp. AL041005-10, Pseudonocardia sp. AL041005-10
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