Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALE77591.1Hypothetical protein. (410 aa)    
Predicted Functional Partners:
ALE77308.1
Tartronate semialdehyde reductase.
 
  
 0.865
ALE77590.1
Major facilitator transporter.
 
     0.809
ALE79520.1
Methyltransferase type 11.
  
     0.513
ALE77589.1
Xylose isomerase.
 
     0.469
ALE81601.1
Hypothetical protein.
 
     0.468
ALE81599.1
Hypothetical protein.
 
     0.429
ALE81608.1
Hypothetical protein.
 
     0.424
Your Current Organism:
Pseudonocardia sp. AL04100510
NCBI taxonomy Id: 445576
Other names: P. sp. AL041005-10, Pseudonocardia sp. AL041005-10
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