STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALE77796.1Branched-chain amino acid transporter. (102 aa)    
Predicted Functional Partners:
ALE77797.1
Branched-chain amino acid permease.
 
   
 0.938
ALE77795.1
Hypothetical protein.
       0.613
ALE80026.1
Hypothetical protein.
 
     0.553
ALE79984.1
Hypothetical protein.
 
     0.549
ALE77953.1
Regulator.
  
     0.548
ALE77954.1
XRE family transcriptional regulator.
 
     0.534
ALE80455.1
Transcriptional regulator.
  
     0.470
ALE79826.1
Hypothetical protein.
  
     0.422
ALE78181.1
Hypothetical protein.
  
     0.418
ALE78918.1
Hypothetical protein.
  
     0.401
Your Current Organism:
Pseudonocardia sp. AL04100510
NCBI taxonomy Id: 445576
Other names: P. sp. AL041005-10, Pseudonocardia sp. AL041005-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.