STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALE77812.1Hypothetical protein; Belongs to the LysR transcriptional regulatory family. (297 aa)    
Predicted Functional Partners:
ALE77813.1
Amino acid transporter.
 
   
 0.954
ALE79674.1
Hypothetical protein.
   
    0.731
ALE78715.1
Transcriptional regulator.
   
    0.668
ALE80000.1
LytTR family transcriptional regulator.
   
    0.668
ALE79430.1
NAD-dependent protein deacetylase.
   
    0.631
cobB-2
NAD-dependent deacetylase; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily.
   
    0.631
ALE78825.1
MarR family transcriptional regulator.
   
    0.615
ALE80138.1
Transcriptional regulator.
  
 
 0.593
ALE80232.1
Hypothetical protein.
  
 
 0.593
ALE77815.1
Hypothetical protein.
  
    0.543
Your Current Organism:
Pseudonocardia sp. AL04100510
NCBI taxonomy Id: 445576
Other names: P. sp. AL041005-10, Pseudonocardia sp. AL041005-10
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.