STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALE77819.1Glycine/betaine ABC transporter ATPase. (402 aa)    
Predicted Functional Partners:
ALE77818.1
Glycine/betaine ABC transporter.
 
 0.999
ALE77820.1
Glycine/betaine ABC transporter substrate-binding protein.
 
 0.999
ALE81525.1
ABC transporter permease.
 
 
 0.839
ALE81527.1
ABC transporter permease.
 
 
 0.822
ALE78905.1
ABC transporter permease.
 
 
 0.820
ALE78904.1
ABC transporter permease.
 
 
 0.814
ALE79884.1
ABC transporter ATP-binding protein.
 
  
 
0.751
ALE81524.1
Hypothetical protein.
 
 
 0.728
ALE77633.1
Multidrug ABC transporter ATPase.
 
   
 
0.723
ALE78903.1
Glycine/betaine ABC transporter substrate-binding protein.
 
 
 0.709
Your Current Organism:
Pseudonocardia sp. AL04100510
NCBI taxonomy Id: 445576
Other names: P. sp. AL041005-10, Pseudonocardia sp. AL041005-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.