STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALE77820.1Glycine/betaine ABC transporter substrate-binding protein. (318 aa)    
Predicted Functional Partners:
ALE77818.1
Glycine/betaine ABC transporter.
 
 
 0.999
ALE77819.1
Glycine/betaine ABC transporter ATPase.
 
 0.999
ALE81525.1
ABC transporter permease.
 
 
 0.746
ALE81527.1
ABC transporter permease.
 
 
 0.722
ALE78905.1
ABC transporter permease.
 
 
 0.692
ALE78904.1
ABC transporter permease.
 
 
 0.687
ALE81524.1
Hypothetical protein.
  
 
 0.679
ALE78903.1
Glycine/betaine ABC transporter substrate-binding protein.
  
 
 0.661
ALE81136.1
Peptide ABC transporter substrate-binding protein.
  
  
  0.643
ALE78674.1
Sugar-binding protein.
  
  
  0.626
Your Current Organism:
Pseudonocardia sp. AL04100510
NCBI taxonomy Id: 445576
Other names: P. sp. AL041005-10, Pseudonocardia sp. AL041005-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.