STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALE77821.1Alpha/beta hydrolase. (246 aa)    
Predicted Functional Partners:
ALE80680.1
benzoyl-CoA oxygenase.
 
    0.516
ALE77176.1
Polyketide synthase.
  
 0.514
ALE77818.1
Glycine/betaine ABC transporter.
       0.474
ALE77819.1
Glycine/betaine ABC transporter ATPase.
       0.474
ALE77820.1
Glycine/betaine ABC transporter substrate-binding protein.
       0.474
ALE77158.1
Peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.459
ALE77181.1
Modular polyketide synthase.
  
 0.446
ALE77179.1
Polyketide synthase.
  
 0.446
ALE77180.1
Polyketide synthase.
  
 0.446
ALE81354.1
Hypothetical protein.
  
 0.419
Your Current Organism:
Pseudonocardia sp. AL04100510
NCBI taxonomy Id: 445576
Other names: P. sp. AL041005-10, Pseudonocardia sp. AL041005-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.