STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALE78011.1Hypothetical protein. (293 aa)    
Predicted Functional Partners:
ALE78012.1
RNA polymerase subunit sigma-24; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.981
ALE78839.1
Hypothetical protein.
  
     0.738
ALE80469.1
Hypothetical protein.
  
     0.681
ALE78010.1
Membrane protein.
 
     0.678
ALE78356.1
Hypothetical protein.
  
     0.665
ALE78349.1
Hypothetical protein.
 
 
 
 0.598
ALE80711.1
Membrane protein.
 
     0.588
ALE79231.1
Hypothetical protein.
 
 
 
 0.573
ALE78250.1
Hypothetical protein.
 
 
 
 0.570
ALE78638.1
Hypothetical protein.
  
   
 0.564
Your Current Organism:
Pseudonocardia sp. AL04100510
NCBI taxonomy Id: 445576
Other names: P. sp. AL041005-10, Pseudonocardia sp. AL041005-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.