STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALE78060.1Propanediol utilization protein. (191 aa)    
Predicted Functional Partners:
pduC
Propanediol dehydratase; With pduED catalyzes the formation of propionaldehyde from 1,2-propanediol.
 0.999
ALE78062.1
Glycerol dehydrogenase.
 
 0.999
ALE78058.1
Hypothetical protein.
 
  
 0.978
ALE78059.1
Glycerol dehydratase.
 
  
 0.958
ALE78064.1
ATP:cob(I)alamin adenosyltransferase.
 
  
 0.925
ALE78063.1
Porin; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
  
 0.800
ALE78057.1
Hypothetical protein.
       0.661
ALE78398.1
CDP-alcohol phosphatidyltransferase.
 
  
 0.660
ALE80318.1
ATP:cob(I)alamin adenosyltransferase.
 
  
 0.613
ALE78056.1
Hypothetical protein.
       0.549
Your Current Organism:
Pseudonocardia sp. AL04100510
NCBI taxonomy Id: 445576
Other names: P. sp. AL041005-10, Pseudonocardia sp. AL041005-10
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.