STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALE78216.1Dehydrogenase. (334 aa)    
Predicted Functional Partners:
ALE77158.1
Peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 0.803
ALE77175.1
Acyl transferase.
  
 0.768
ALE77176.1
Polyketide synthase.
  
 0.768
ALE77167.1
Peptide synthetase.
  
 0.739
ALE77159.1
Hypothetical protein.
  
 0.725
ALE77166.1
Peptide synthetase.
  
 0.725
ALE78217.1
Hypothetical protein.
       0.723
ALE78218.1
Hypothetical protein.
       0.723
ALE77181.1
Modular polyketide synthase.
  
 0.711
ALE77178.1
Polyketide synthase.
  
 0.711
Your Current Organism:
Pseudonocardia sp. AL04100510
NCBI taxonomy Id: 445576
Other names: P. sp. AL041005-10, Pseudonocardia sp. AL041005-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.