STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALE78280.1MFS transporter. (390 aa)    
Predicted Functional Partners:
ALE78281.1
Nitrate ABC transporter substrate-binding protein.
 
     0.782
ALE81273.1
Hypothetical protein.
  
     0.669
ALE80758.1
MFS transporter.
 
   
 0.639
ALE78139.1
Hypothetical protein.
  
     0.613
ALE79695.1
MFS transporter.
  
     0.605
ALE79493.1
Transporter.
  
   
 0.548
ALE81561.1
Hypothetical protein.
  
     0.543
ALE78282.1
Nitrate ABC transporter ATPase.
       0.514
ALE78283.1
Nitrate ABC transporter permease.
       0.514
ALE78366.1
Major facilitator transporter.
  
   
 0.503
Your Current Organism:
Pseudonocardia sp. AL04100510
NCBI taxonomy Id: 445576
Other names: P. sp. AL041005-10, Pseudonocardia sp. AL041005-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.