Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALE77158.1 | ALE77175.1 | WY02_00155 | WY02_00230 | Peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family. | Acyl transferase. | 0.999 |
ALE77158.1 | ALE77176.1 | WY02_00155 | WY02_28925 | Peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family. | Polyketide synthase. | 0.997 |
ALE77158.1 | ALE78046.1 | WY02_00155 | WY02_05960 | Peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family. | Short-chain dehydrogenase. | 0.472 |
ALE77158.1 | ALE78308.1 | WY02_00155 | WY02_07535 | Peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family. | Dehydrogenase. | 0.508 |
ALE77158.1 | ALE78463.1 | WY02_00155 | WY02_08535 | Peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family. | FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.931 |
ALE77158.1 | ALE78769.1 | WY02_00155 | WY02_10370 | Peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family. | Hypothetical protein. | 0.508 |
ALE77175.1 | ALE77158.1 | WY02_00230 | WY02_00155 | Acyl transferase. | Peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.999 |
ALE77175.1 | ALE77176.1 | WY02_00230 | WY02_28925 | Acyl transferase. | Polyketide synthase. | 0.999 |
ALE77175.1 | ALE78308.1 | WY02_00230 | WY02_07535 | Acyl transferase. | Dehydrogenase. | 0.433 |
ALE77175.1 | ALE78463.1 | WY02_00230 | WY02_08535 | Acyl transferase. | FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.785 |
ALE77175.1 | ALE78769.1 | WY02_00230 | WY02_10370 | Acyl transferase. | Hypothetical protein. | 0.433 |
ALE77176.1 | ALE77158.1 | WY02_28925 | WY02_00155 | Polyketide synthase. | Peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.997 |
ALE77176.1 | ALE77175.1 | WY02_28925 | WY02_00230 | Polyketide synthase. | Acyl transferase. | 0.999 |
ALE77176.1 | ALE78308.1 | WY02_28925 | WY02_07535 | Polyketide synthase. | Dehydrogenase. | 0.433 |
ALE77176.1 | ALE78463.1 | WY02_28925 | WY02_08535 | Polyketide synthase. | FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.979 |
ALE77176.1 | ALE78769.1 | WY02_28925 | WY02_10370 | Polyketide synthase. | Hypothetical protein. | 0.433 |
ALE77176.1 | ALE80267.1 | WY02_28925 | WY02_19655 | Polyketide synthase. | Hypothetical protein. | 0.601 |
ALE77176.1 | ALE80565.1 | WY02_28925 | WY02_21515 | Polyketide synthase. | Hypothetical protein. | 0.631 |
ALE77243.1 | ALE78308.1 | WY02_00675 | WY02_07535 | Molecular chaperone GroES. | Dehydrogenase. | 0.498 |
ALE77243.1 | ALE81620.1 | WY02_00675 | WY02_28390 | Molecular chaperone GroES. | DNA topoisomerase. | 0.406 |
page 1 of 3