STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALE78335.1Dehydrogenase. (535 aa)    
Predicted Functional Partners:
ALE78336.1
Cyclase.
 
   
 0.875
ALE78337.1
Hypothetical protein.
 
     0.654
ALE78342.1
Indolepyruvate oxidoreductase.
 
     0.636
ALE78338.1
Short-chain dehydrogenase.
 
   
 0.623
ALE78343.1
Indolepyruvate ferredoxin oxidoreductase.
 
     0.564
ALE78339.1
Monooxygenase.
 
    0.553
ALE78334.1
Luciferase.
  
   
 0.463
ALE78340.1
Hypothetical protein.
 
     0.431
Your Current Organism:
Pseudonocardia sp. AL04100510
NCBI taxonomy Id: 445576
Other names: P. sp. AL041005-10, Pseudonocardia sp. AL041005-10
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.