STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALE78343.1Indolepyruvate ferredoxin oxidoreductase. (722 aa)    
Predicted Functional Partners:
ALE78342.1
Indolepyruvate oxidoreductase.
 
 
 0.931
ALE78341.1
Endoribonuclease L-PSP.
 
     0.759
ALE78336.1
Cyclase.
 
     0.732
ALE81624.1
Hypothetical protein.
 
   
 0.720
ALE81623.1
Hypothetical protein.
 
   
 0.709
ALE77503.1
NADH dehydrogenase.
   
 
 0.674
ALE79179.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
  
 
 0.638
ALE78345.1
phenylacetate--CoA ligase.
 
    0.633
ALE78337.1
Hypothetical protein.
  
     0.615
ALE78338.1
Short-chain dehydrogenase.
  
     0.567
Your Current Organism:
Pseudonocardia sp. AL04100510
NCBI taxonomy Id: 445576
Other names: P. sp. AL041005-10, Pseudonocardia sp. AL041005-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.