STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALE78392.1(2Fe-2S)-binding protein. (125 aa)    
Predicted Functional Partners:
ALE80340.1
Pyridine nucleotide-disulfide oxidoreductase.
  
 
 0.957
ALE80692.1
3-phenylpropionate dioxygenase.
  
  
 
0.922
ALE78611.1
Pyridine nucleotide-disulfide oxidoreductase.
  
 
 0.600
ALE79951.1
Pyridine nucleotide-disulfide oxidoreductase.
  
 
 0.600
ALE80568.1
Electron transfer flavoprotein.
  
 
 0.600
ALE80569.1
Nitrite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
 
 0.598
ALE78205.1
uroporphyrin-III C-methyltransferase.
  
  
 0.596
ALE80693.1
Pyridine nucleotide-disulfide oxidoreductase.
  
 0.568
ALE79221.1
uroporphyrin-III methyltransferase.
  
  
 0.566
ALE80721.1
Ferredoxin reductase.
  
 0.561
Your Current Organism:
Pseudonocardia sp. AL04100510
NCBI taxonomy Id: 445576
Other names: P. sp. AL041005-10, Pseudonocardia sp. AL041005-10
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