STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALE78547.1Luciferase. (278 aa)    
Predicted Functional Partners:
ALE78074.1
F420-dependent oxidoreductase.
  
     0.769
ALE79970.1
5,10-methylene tetrahydromethanopterin reductase.
  
     0.726
ALE78548.1
Hypothetical protein.
  
    0.674
ALE78896.1
F420-dependent oxidoreductase.
  
     0.648
ALE77158.1
Peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
    
 0.633
ALE81353.1
Hypothetical protein.
    
 0.626
ALE77167.1
Peptide synthetase.
    
 0.625
ALE77176.1
Polyketide synthase.
  
 
 0.623
ALE78956.1
2-phospho-L-lactate transferase.
 
   
 0.622
ALE77163.1
Peptide synthetase.
    
 0.612
Your Current Organism:
Pseudonocardia sp. AL04100510
NCBI taxonomy Id: 445576
Other names: P. sp. AL041005-10, Pseudonocardia sp. AL041005-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.