STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALE78559.1ABC transporter ATP-binding protein. (357 aa)    
Predicted Functional Partners:
ALE79135.1
ABC transporter permease.
 0.984
ALE78564.1
ABC transporter permease.
 
 0.982
ALE79134.1
ABC transporter permease.
 
 0.982
ALE79937.1
ABC transporter permease.
 
 0.981
ALE78565.1
ABC transporter permease.
 0.980
ALE79936.1
ABC transporter substrate-binding protein.
 0.979
ALE79938.1
ABC transporter.
  
  
 
0.903
ALE79136.1
ABC transporter ATP-binding protein.
  
  
 
0.900
ALE79131.1
Mammalian cell entry protein.
 
 
 0.899
ALE79133.1
Mammalian cell entry protein.
 
 
 0.896
Your Current Organism:
Pseudonocardia sp. AL04100510
NCBI taxonomy Id: 445576
Other names: P. sp. AL041005-10, Pseudonocardia sp. AL041005-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.