Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALE77276.1 | ALE78587.1 | WY02_00880 | WY02_09245 | Hypothetical protein. | Flavin reductase. | 0.406 |
ALE78587.1 | ALE77276.1 | WY02_09245 | WY02_00880 | Flavin reductase. | Hypothetical protein. | 0.406 |
ALE78587.1 | ALE78627.1 | WY02_09245 | WY02_09470 | Flavin reductase. | Pyoverdin chromophore biosynthetic protein pvcC. | 0.416 |
ALE78587.1 | ALE80639.1 | WY02_09245 | WY02_22000 | Flavin reductase. | Hypothetical protein. | 0.424 |
ALE78587.1 | ALE81383.1 | WY02_09245 | WY02_26850 | Flavin reductase. | Ferredoxin. | 0.401 |
ALE78587.1 | ribBA-2 | WY02_09245 | WY02_09240 | Flavin reductase. | GTP cyclohydrolase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.656 |
ALE78627.1 | ALE78587.1 | WY02_09470 | WY02_09245 | Pyoverdin chromophore biosynthetic protein pvcC. | Flavin reductase. | 0.416 |
ALE80639.1 | ALE78587.1 | WY02_22000 | WY02_09245 | Hypothetical protein. | Flavin reductase. | 0.424 |
ALE81383.1 | ALE78587.1 | WY02_26850 | WY02_09245 | Ferredoxin. | Flavin reductase. | 0.401 |
ribBA-2 | ALE78587.1 | WY02_09240 | WY02_09245 | GTP cyclohydrolase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | Flavin reductase. | 0.656 |