STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALE78608.1Amine oxidase. (438 aa)    
Predicted Functional Partners:
ALE77621.1
Hypothetical protein.
  
 
 0.924
ALE78607.1
Hypothetical protein.
 
   
 0.844
ALE78598.1
Dioxygenase.
 
   
 0.785
ALE78597.1
Dioxygenase.
 
     0.774
ALE79942.1
Hypothetical protein.
  
     0.761
ALE79940.1
Hypothetical protein.
  
     0.742
ALE79941.1
Hypothetical protein.
  
     0.731
ALE79939.1
Hypothetical protein.
  
     0.728
ALE79139.1
Sterol carrier protein.
 
    0.712
ALE78570.1
Hypothetical protein.
  
   
 0.696
Your Current Organism:
Pseudonocardia sp. AL04100510
NCBI taxonomy Id: 445576
Other names: P. sp. AL041005-10, Pseudonocardia sp. AL041005-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.