Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ALE78663.1acid--CoA ligase. (485 aa)    
Predicted Functional Partners:
ALE77176.1
Polyketide synthase.
  
 0.964
ALE77175.1
Acyl transferase.
  
 0.958
ALE77179.1
Polyketide synthase.
  
 0.941
ALE77180.1
Polyketide synthase.
  
 0.941
ALE77181.1
Modular polyketide synthase.
  
 0.940
ALE77178.1
Polyketide synthase.
  
 0.908
ALE77158.1
Peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 0.907
ALE81354.1
Hypothetical protein.
  
 0.844
ALE77163.1
Peptide synthetase.
 
 0.782
ALE78664.1
Dimethylmenaquinone methyltransferase.
       0.779
Your Current Organism:
Pseudonocardia sp. AL04100510
NCBI taxonomy Id: 445576
Other names: P. sp. AL041005-10, Pseudonocardia sp. AL041005-10
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