STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALE78878.1Hypothetical protein. (262 aa)    
Predicted Functional Partners:
ALE77270.1
Hypothetical protein.
  
     0.541
ALE80552.1
Membrane protein.
  
    0.448
ALE77344.1
Polyketide cyclase.
  
     0.434
ALE78903.1
Glycine/betaine ABC transporter substrate-binding protein.
  
    0.433
ALE81524.1
Hypothetical protein.
  
    0.433
ALE77336.1
Hypothetical protein.
  
    0.431
ALE78638.1
Hypothetical protein.
  
    0.424
ALE78879.1
Hypothetical protein.
       0.407
ALE79394.1
Hypothetical protein; Belongs to the UPF0337 (CsbD) family.
 
    0.405
ALE77271.1
Hypothetical protein.
  
    0.400
Your Current Organism:
Pseudonocardia sp. AL04100510
NCBI taxonomy Id: 445576
Other names: P. sp. AL041005-10, Pseudonocardia sp. AL041005-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.