STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALE79304.1ABC transporter. (580 aa)    
Predicted Functional Partners:
ALE77967.1
Peptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
    
0.805
ALE79303.1
Hypothetical protein.
  
  
 0.796
ALE78906.1
Glycine/betaine ABC transporter ATPase.
 
     
0.729
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.685
ALE79327.1
ATPase.
 
 
 0.632
ALE78737.1
Hypothetical protein.
  
 0.595
ALE77179.1
Polyketide synthase.
 
 0.588
ALE77176.1
Polyketide synthase.
  
 0.581
ALE81354.1
Hypothetical protein.
 
 0.541
ALE77181.1
Modular polyketide synthase.
  
 0.534
Your Current Organism:
Pseudonocardia sp. AL04100510
NCBI taxonomy Id: 445576
Other names: P. sp. AL041005-10, Pseudonocardia sp. AL041005-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.