STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALE79688.1Hypothetical protein. (218 aa)    
Predicted Functional Partners:
ALE80996.1
Hypothetical protein.
  
     0.727
ALE79989.1
Hypothetical protein.
  
     0.673
ALE79899.1
AraC family transcriptional regulator.
  
     0.622
ALE79687.1
Hypothetical protein.
       0.551
ALE78653.1
AraC family transcriptional regulator.
  
     0.500
ALE77283.1
Cupin.
  
     0.460
ALE77962.1
AraC family transcriptional regulator.
 
 
 0.450
ALE80123.1
AraC family transcriptional regulator.
  
     0.430
ALE77814.1
Hypothetical protein.
  
     0.424
ALE80211.1
AraC family transcriptional regulator.
 
 
 0.402
Your Current Organism:
Pseudonocardia sp. AL04100510
NCBI taxonomy Id: 445576
Other names: P. sp. AL041005-10, Pseudonocardia sp. AL041005-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.