STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALE79942.1Hypothetical protein. (765 aa)    
Predicted Functional Partners:
ALE79941.1
Hypothetical protein.
 
     0.794
ALE79940.1
Hypothetical protein.
 
     0.789
ALE79939.1
Hypothetical protein.
 
     0.779
ALE78608.1
Amine oxidase.
  
     0.761
ALE78597.1
Dioxygenase.
  
     0.712
ALE78598.1
Dioxygenase.
 
     0.685
ALE78574.1
Sterol carrier protein.
  
     0.628
ALE79139.1
Sterol carrier protein.
  
     0.628
ALE81473.1
Hypothetical protein.
  
     0.614
ALE79144.1
Sterol carrier protein.
  
     0.541
Your Current Organism:
Pseudonocardia sp. AL04100510
NCBI taxonomy Id: 445576
Other names: P. sp. AL041005-10, Pseudonocardia sp. AL041005-10
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.