Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALE77630.1 | ALE79956.1 | WY02_03280 | WY02_17645 | ABC transporter. | cysteinyl-tRNA synthetase. | 0.569 |
ALE77630.1 | serS | WY02_03280 | WY02_21605 | ABC transporter. | Hypothetical protein; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec). | 0.489 |
ALE77907.1 | ALE79956.1 | WY02_05035 | WY02_17645 | Hypothetical protein. | cysteinyl-tRNA synthetase. | 0.809 |
ALE77907.1 | cysM | WY02_05035 | WY02_22440 | Hypothetical protein. | Cysteine synthase; Catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide. | 0.904 |
ALE78181.1 | ALE79956.1 | WY02_06770 | WY02_17645 | Hypothetical protein. | cysteinyl-tRNA synthetase. | 0.664 |
ALE79944.1 | ALE79956.1 | WY02_17570 | WY02_17645 | Hypothetical protein. | cysteinyl-tRNA synthetase. | 0.637 |
ALE79944.1 | serS | WY02_17570 | WY02_21605 | Hypothetical protein. | Hypothetical protein; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec). | 0.716 |
ALE79952.1 | ALE79956.1 | WY02_17620 | WY02_17645 | Hypothetical protein. | cysteinyl-tRNA synthetase. | 0.650 |
ALE79952.1 | serS | WY02_17620 | WY02_21605 | Hypothetical protein. | Hypothetical protein; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec). | 0.739 |
ALE79956.1 | ALE77630.1 | WY02_17645 | WY02_03280 | cysteinyl-tRNA synthetase. | ABC transporter. | 0.569 |
ALE79956.1 | ALE77907.1 | WY02_17645 | WY02_05035 | cysteinyl-tRNA synthetase. | Hypothetical protein. | 0.809 |
ALE79956.1 | ALE78181.1 | WY02_17645 | WY02_06770 | cysteinyl-tRNA synthetase. | Hypothetical protein. | 0.664 |
ALE79956.1 | ALE79944.1 | WY02_17645 | WY02_17570 | cysteinyl-tRNA synthetase. | Hypothetical protein. | 0.637 |
ALE79956.1 | ALE79952.1 | WY02_17645 | WY02_17620 | cysteinyl-tRNA synthetase. | Hypothetical protein. | 0.650 |
ALE79956.1 | alaS | WY02_17645 | WY02_04055 | cysteinyl-tRNA synthetase. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.578 |
ALE79956.1 | cysM | WY02_17645 | WY02_22440 | cysteinyl-tRNA synthetase. | Cysteine synthase; Catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide. | 0.585 |
ALE79956.1 | pheT | WY02_17645 | WY02_28785 | cysteinyl-tRNA synthetase. | phenylalanyl-tRNA synthetase subunit beta; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.667 |
ALE79956.1 | serS | WY02_17645 | WY02_21605 | cysteinyl-tRNA synthetase. | Hypothetical protein; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec). | 0.729 |
ALE79956.1 | valS | WY02_17645 | WY02_24895 | cysteinyl-tRNA synthetase. | valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily. | 0.651 |
alaS | ALE79956.1 | WY02_04055 | WY02_17645 | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | cysteinyl-tRNA synthetase. | 0.578 |
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