STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALE80286.1ABC transporter permease. (252 aa)    
Predicted Functional Partners:
ALE80287.1
ABC transporter.
 
 
 0.952
ALE77188.1
Glycosyl transferase family 8.
 
 
 0.890
ALE80385.1
ABC transporter.
 
 
 0.882
ALE80170.1
ABC transporter.
 
 
 0.880
ALE80288.1
Hypothetical protein.
 
     0.688
ALE78934.1
Daunorubicin ABC transporter ATPase.
 
 
 0.642
ALE78326.1
Hypothetical protein.
  
  
  0.641
ALE78327.1
Sulfate ABC transporter ATPase.
 
 
 0.625
ALE80248.1
Multidrug ABC transporter ATPase.
 
 
 0.614
ALE81204.1
Multidrug ABC transporter ATPase.
 
 
 0.609
Your Current Organism:
Pseudonocardia sp. AL04100510
NCBI taxonomy Id: 445576
Other names: P. sp. AL041005-10, Pseudonocardia sp. AL041005-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.