STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALE80330.1XRE family transcriptional regulator. (402 aa)    
Predicted Functional Partners:
ALE80026.1
Hypothetical protein.
  
     0.729
ALE79984.1
Hypothetical protein.
  
     0.699
ALE77945.1
Hypothetical protein.
  
   
 0.691
ALE77954.1
XRE family transcriptional regulator.
  
     0.664
ALE78918.1
Hypothetical protein.
  
     0.645
ALE80455.1
Transcriptional regulator.
  
   
 0.629
ALE77953.1
Regulator.
  
   
 0.620
ALE80329.1
NUDIX hydrolase; Belongs to the Nudix hydrolase family.
  
    0.614
ALE79458.1
Hypothetical protein.
  
     0.602
ALE80410.1
Cell division protein FtsK.
 
   
 0.600
Your Current Organism:
Pseudonocardia sp. AL04100510
NCBI taxonomy Id: 445576
Other names: P. sp. AL041005-10, Pseudonocardia sp. AL041005-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.