STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALE80578.1Transporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (555 aa)    
Predicted Functional Partners:
ALE80577.1
Membrane protein.
 
  
 0.935
ALE79817.1
Clumping factor B.
 
  
 0.890
ALE79007.1
Membrane protein.
 
  
 0.876
ALE80579.1
Hypothetical protein.
 
     0.864
ALE80576.1
Acetate permease; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
    
0.639
ALE79814.1
LytR family transcriptional regulator.
 
     0.607
ALE79815.1
Hypothetical protein.
 
     0.604
ALE79812.1
Histidine kinase.
 
     0.600
ALE80580.1
Hypothetical protein.
 
     0.595
ALE80786.1
LytR family transcriptional regulator.
 
     0.588
Your Current Organism:
Pseudonocardia sp. AL04100510
NCBI taxonomy Id: 445576
Other names: P. sp. AL041005-10, Pseudonocardia sp. AL041005-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.