Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALE80538.1 | ALE80718.1 | WY02_21365 | WY02_22495 | Sodium:proton antiporter; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. | Peroxiredoxin. | 0.536 |
ALE80718.1 | ALE80538.1 | WY02_22495 | WY02_21365 | Peroxiredoxin. | Sodium:proton antiporter; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. | 0.536 |
ALE80718.1 | ALE80719.1 | WY02_22495 | WY02_22500 | Peroxiredoxin. | Endonuclease. | 0.553 |
ALE80718.1 | ALE81457.1 | WY02_22495 | WY02_27330 | Peroxiredoxin. | Thioredoxin. | 0.577 |
ALE80719.1 | ALE80718.1 | WY02_22500 | WY02_22495 | Endonuclease. | Peroxiredoxin. | 0.553 |
ALE81457.1 | ALE80718.1 | WY02_27330 | WY02_22495 | Thioredoxin. | Peroxiredoxin. | 0.577 |