STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALE80721.1Ferredoxin reductase. (405 aa)    
Predicted Functional Partners:
ALE80694.1
Sarcosine oxidase subunit delta.
  
 
 0.794
ALE80342.1
2Fe-2S ferredoxin.
 
 
 0.695
ALE77722.1
Riboflavin synthase subunit alpha.
   
    0.640
ALE80696.1
Sarcosine dehydrogenase; Belongs to the GcvT family.
  
 
 0.608
ALE80695.1
Sarcosine oxidase subunit gamma.
  
 
 0.599
ALE81370.1
Phenylacetic acid degradation protein.
  
 
 0.558
rpmJ
50S ribosomal protein L36; Smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif.
   
   0.537
ALE77245.1
Ferredoxin; Belongs to the cytochrome P450 family.
  
 
 0.527
ALE80570.1
Nitrite reductase.
 
 
 0.522
ALE79959.1
Sulfurtransferase.
  
 0.504
Your Current Organism:
Pseudonocardia sp. AL04100510
NCBI taxonomy Id: 445576
Other names: P. sp. AL041005-10, Pseudonocardia sp. AL041005-10
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.