Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALE78039.1 | ALE80800.1 | WY02_05920 | WY02_23020 | Hypothetical protein. | Phosphoglycerate mutase. | 0.458 |
ALE78039.1 | ALE81178.1 | WY02_05920 | WY02_25465 | Hypothetical protein. | Histidine phosphatase; Belongs to the phosphoglycerate mutase family. | 0.450 |
ALE78039.1 | ALE81595.1 | WY02_05920 | WY02_28240 | Hypothetical protein. | ATP-binding protein. | 0.746 |
ALE78039.1 | cobQ | WY02_05920 | WY02_06940 | Hypothetical protein. | Cobalamin biosynthesis protein CobQ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. | 0.875 |
ALE78039.1 | cobS | WY02_05920 | WY02_05925 | Hypothetical protein. | Cobalamin synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family. | 0.985 |
ALE78039.1 | cobT | WY02_05920 | WY02_01525 | Hypothetical protein. | Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB). | 0.933 |
ALE78910.1 | ALE80800.1 | WY02_11250 | WY02_23020 | Acid phosphatase; Forms a homodimer in Mycobacterium tuberculosis; belongs to the dPGM superfamily. | Phosphoglycerate mutase. | 0.538 |
ALE78910.1 | ALE81595.1 | WY02_11250 | WY02_28240 | Acid phosphatase; Forms a homodimer in Mycobacterium tuberculosis; belongs to the dPGM superfamily. | ATP-binding protein. | 0.503 |
ALE78910.1 | cobQ | WY02_11250 | WY02_06940 | Acid phosphatase; Forms a homodimer in Mycobacterium tuberculosis; belongs to the dPGM superfamily. | Cobalamin biosynthesis protein CobQ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. | 0.405 |
ALE80800.1 | ALE78039.1 | WY02_23020 | WY02_05920 | Phosphoglycerate mutase. | Hypothetical protein. | 0.458 |
ALE80800.1 | ALE78910.1 | WY02_23020 | WY02_11250 | Phosphoglycerate mutase. | Acid phosphatase; Forms a homodimer in Mycobacterium tuberculosis; belongs to the dPGM superfamily. | 0.538 |
ALE80800.1 | ALE80801.1 | WY02_23020 | WY02_23025 | Phosphoglycerate mutase. | Hypothetical protein. | 0.844 |
ALE80800.1 | ALE81178.1 | WY02_23020 | WY02_25465 | Phosphoglycerate mutase. | Histidine phosphatase; Belongs to the phosphoglycerate mutase family. | 0.576 |
ALE80800.1 | ALE81595.1 | WY02_23020 | WY02_28240 | Phosphoglycerate mutase. | ATP-binding protein. | 0.503 |
ALE80800.1 | cobQ | WY02_23020 | WY02_06940 | Phosphoglycerate mutase. | Cobalamin biosynthesis protein CobQ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. | 0.480 |
ALE80800.1 | cobS | WY02_23020 | WY02_05925 | Phosphoglycerate mutase. | Cobalamin synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family. | 0.491 |
ALE80800.1 | cobT | WY02_23020 | WY02_01525 | Phosphoglycerate mutase. | Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB). | 0.465 |
ALE80800.1 | gpmA | WY02_23020 | WY02_13250 | Phosphoglycerate mutase. | Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 0.478 |
ALE80800.1 | guaB | WY02_23020 | WY02_12100 | Phosphoglycerate mutase. | Inosine-5-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.411 |
ALE80801.1 | ALE80800.1 | WY02_23025 | WY02_23020 | Hypothetical protein. | Phosphoglycerate mutase. | 0.844 |
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