STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALE81094.1Fatty acid desaturase. (354 aa)    
Predicted Functional Partners:
ALE78359.1
stearoyl-CoA 9-desaturase.
 
 0.997
ALE77297.1
stearoyl-CoA 9-desaturase.
  
 0.916
ALE78895.1
stearoyl-CoA 9-desaturase.
  
 0.916
ALE79401.1
stearoyl-CoA 9-desaturase.
  
 0.916
ALE78358.1
Fatty acid desaturase.
  
  
 
0.902
ALE78325.1
Alkane 1-monooxygenase.
 
  
 0.699
ALE81095.1
Hypothetical protein.
       0.620
ALE79083.1
Hypothetical protein.
 
     0.617
ALE79933.1
Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
   
 0.555
ALE79487.1
acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Belongs to the thiolase-like superfamily. Thiolase family.
  
   
 0.516
Your Current Organism:
Pseudonocardia sp. AL04100510
NCBI taxonomy Id: 445576
Other names: P. sp. AL041005-10, Pseudonocardia sp. AL041005-10
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