STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALE81393.1Oxidoreductase. (264 aa)    
Predicted Functional Partners:
ALE81392.1
TetR family transcriptional regulator.
 
     0.822
ALE78769.1
Hypothetical protein.
  
     0.738
ALE78719.1
Hypothetical protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 0.724
ALE78578.1
Hypothetical protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.687
ALE77158.1
Peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.508
ALE78463.1
FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
 
 0.492
ALE79628.1
Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 0.488
ALE80267.1
Hypothetical protein.
    
 0.470
ALE79399.1
AMP-dependent acyl-CoA synthetase.
  
 
 0.458
ALE80565.1
Hypothetical protein.
   
 
 0.441
Your Current Organism:
Pseudonocardia sp. AL04100510
NCBI taxonomy Id: 445576
Other names: P. sp. AL041005-10, Pseudonocardia sp. AL041005-10
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