Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALE79431.1 | ALE79432.1 | WY02_14435 | WY02_14440 | UDP-glucose 4-epimerase. | Catalyzes the oxidation of acetaldehyde, benzaldehyde, propionaldehyde and other aldehydes; Belongs to the aldehyde dehydrogenase family. | 0.951 |
ALE79431.1 | ALE81653.1 | WY02_14435 | WY02_28635 | UDP-glucose 4-epimerase. | Diguanylate cyclase. | 0.551 |
ALE79432.1 | ALE79431.1 | WY02_14440 | WY02_14435 | Catalyzes the oxidation of acetaldehyde, benzaldehyde, propionaldehyde and other aldehydes; Belongs to the aldehyde dehydrogenase family. | UDP-glucose 4-epimerase. | 0.951 |
ALE79432.1 | ALE81653.1 | WY02_14440 | WY02_28635 | Catalyzes the oxidation of acetaldehyde, benzaldehyde, propionaldehyde and other aldehydes; Belongs to the aldehyde dehydrogenase family. | Diguanylate cyclase. | 0.487 |
ALE80362.1 | ALE81653.1 | WY02_20270 | WY02_28635 | Hypothetical protein. | Diguanylate cyclase. | 0.504 |
ALE81652.1 | ALE81653.1 | WY02_28630 | WY02_28635 | Hypothetical protein. | Diguanylate cyclase. | 0.552 |
ALE81653.1 | ALE79431.1 | WY02_28635 | WY02_14435 | Diguanylate cyclase. | UDP-glucose 4-epimerase. | 0.551 |
ALE81653.1 | ALE79432.1 | WY02_28635 | WY02_14440 | Diguanylate cyclase. | Catalyzes the oxidation of acetaldehyde, benzaldehyde, propionaldehyde and other aldehydes; Belongs to the aldehyde dehydrogenase family. | 0.487 |
ALE81653.1 | ALE80362.1 | WY02_28635 | WY02_20270 | Diguanylate cyclase. | Hypothetical protein. | 0.504 |
ALE81653.1 | ALE81652.1 | WY02_28635 | WY02_28630 | Diguanylate cyclase. | Hypothetical protein. | 0.552 |
ALE81653.1 | ALE81654.1 | WY02_28635 | WY02_28640 | Diguanylate cyclase. | Diacetyl reductase. | 0.441 |
ALE81654.1 | ALE81653.1 | WY02_28640 | WY02_28635 | Diacetyl reductase. | Diguanylate cyclase. | 0.441 |