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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ67436.1Cysteine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family. (265 aa)    
Predicted Functional Partners:
AKJ67435.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.996
AKJ69590.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.991
artP-2
Arginine transporter ATP-binding subunit; With ArtMQJI transports arginine across the inner membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.945
AKJ68748.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.942
AKJ67694.1
Nickel transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.941
AKJ67951.1
Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.934
AKJ67791.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.917
AKJ67952.1
Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.911
AKJ68984.1
Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.908
AKJ69589.1
Cysteine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.901
Your Current Organism:
Pandoraea thiooxydans
NCBI taxonomy Id: 445709
Other names: Burkholderia sp. ATSB16, KACC 12757, LMG 24779, LMG:24779, P. thiooxydans, Pandoraea thiooxydans Anandham et al. 2010, strain ATSB16
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