STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ68341.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (237 aa)    
Predicted Functional Partners:
AKJ68339.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.818
AKJ69452.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.760
AKJ67202.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.747
AKJ67640.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.735
AKJ67203.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.714
AKJ67730.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.686
AKJ68340.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.680
AKJ68708.1
Phosphate regulon sensor histidine kinase PhoR; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.680
AKJ70748.1
Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.680
AKJ67012.1
Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.662
Your Current Organism:
Pandoraea thiooxydans
NCBI taxonomy Id: 445709
Other names: Burkholderia sp. ATSB16, KACC 12757, LMG 24779, LMG:24779, P. thiooxydans, Pandoraea thiooxydans Anandham et al. 2010, strain ATSB16
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.