STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AND67491.1Hypothetical protein; Pfam: Polyketide cyclase / dehydrase and lipid transport. (174 aa)    
Predicted Functional Partners:
AND70986.1
Hypothetical protein; TIGRFAM: AA-adenyl-dom: amino acid adenylation domain; Pfam: AMP-binding enzyme C-terminal domain; Pfam: Phosphopantetheine attachment site; Pfam: AMP-binding enzyme; Belongs to the ATP-dependent AMP-binding enzyme family.
 
  
 0.976
AND70721.1
Hypothetical protein; SMART: Bacterial periplasmic substrate-binding proteins; Pfam: Bacterial extracellular solute-binding proteins, family 3.
  
     0.767
AND70720.1
Alcohol dehydrogenase (cytochrome c); Pfam: PQQ enzyme repeat; Pfam: PQQ-like domain; SMART: beta-propeller repeat; TIGRFAM: PQQ_enz_alc_DH: PQQ-dependent dehydrogenase, methanol/ethanol family.
  
     0.754
AND70725.1
Hypothetical protein; Pfam: TonB-dependent Receptor Plug Domain; Pfam: TonB dependent receptor.
  
     0.679
AND70987.1
Glutamate-1-semialdehyde 2,1-aminomutase; Pfam: Condensation domain; TIGRFAM: AA-adenyl-dom: amino acid adenylation domain; Pfam: Acyl transferase domain; Pfam: Phosphopantetheine attachment site; SMART: Phosphopantetheine attachment site; Pfam: AMP-binding enzyme C-terminal domain; Pfam: Beta-ketoacyl synthase, C-terminal domain; SMART: Beta-ketoacyl synthase; Pfam: Beta-ketoacyl synthase, N-terminal domain; SMART: Acyl transferase domain in polyketide synthase (PKS) enzymes; Pfam: Aminotransferase class-III; Pfam: HxxPF-repeated domain; Pfam: AMP-binding enzyme.
  
  
 0.643
AND70675.1
Pyrrolo-quinoline quinone; TIGRFAM: PQQ_enz_alc_DH: PQQ-dependent dehydrogenase, methanol/ethanol family; Pfam: PQQ-like domain; SMART: beta-propeller repeat; Pfam: PQQ enzyme repeat.
  
     0.637
AND70676.1
Hypothetical protein.
  
    0.458
AND67492.1
Pfam: OsmC-like protein.
       0.444
AND67495.1
Hypothetical protein; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family.
 
     0.418
Your Current Organism:
Dyella thiooxydans
NCBI taxonomy Id: 445710
Other names: D. thiooxydans, Dyella sp. ATSB10, Dyella thiooxydans Anandham et al. 2011, KACC 12756, LMG 24673, LMG:24673, strain ATSB10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.